5th IECA Conference 2011Gene Regulatory Networks in the Enterobacteriaceae
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| Chairs | Barry Wanner (Purdue University) Tyrrell Conway (University of Oklahoma) Mustafa Khammash (ucsb) |
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| Date | Monday December 5 2011 - Friday December 9 2011 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Advertising Opportunities | Please contact us to discuss advertising, exhibition & sponsorship opportunities at the 5th IECA conference. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Synopsis | Zing-IECA 2011 will bring together experimental biologists, computational modelers, and information resource scientists (bioinformaticians) with interests in single-cell biology and the emerging field of RNA sequencing (RNA-Seq) in model bacteria. From its inception at the 10th International Conference on Intelligent Systems for Molecular Biology that was held in Edmonton, Canada in August 2002 {29832}, IECA has held four interdisciplinary workshops and four conferences that brought together experimentalists, modelers, and computational scientists to discuss different studies of model bacteria. The first workshop was held at North Mymms, UK in November 2002 and concerned strategies for interdisciplinary research among computational biologists, experimentalists, and modelers. The 2nd IECA workshop was held the San Diego Supercomputer Center (SDSC) in March 2003 and focused on bioinformatics. The 3rd IECA workshop was held at the Max Planck Institute for Dynamics of Complex Technical Systems in Magdeburg, Germany in March 2003 and focused on model-driven experimentation. The 1st IECA conference was held at the Keio University Institute for Advanced Biosciences, Tsuruoka City, Japan and focused on high-throughput experimentation and modeling. The 2nd IECA conference was held in Banff, Canada in June 2004 and focused on the minimal genome for modeling. The 3rd IECA conference was held at JeJu Island, Korea in November 2006 and focused on metabolic engineering of model bacteria. The 4th IECA conference was held at Hinxton, UK and focused on experimentation, modeling, and informatics related to pathogenesis of closely related bacteria. The 4th IECA workshop was held in West Lafayette, USA in April 2010 and focused on transcriptomics of model bacteria. Accordingly, Zing-IECA 2011 will be the 5th IECA conference. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Confirmed oral presentations |
Programme · Talk Titles
Plenary
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| Abstract submission |
Sorry, but all abstract deadlines have passed.
To secure your place at the conference, register now. |
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Register now ( ) to secure your place. |
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Fees |
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Multiple attendance discount: 3 or more members from the same lab are eligible for a discount. Please contact us. Multiple conference discount: We can offer you a discount if you wish to attend multiple conferences. Please contact us. |
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5th IECA conference 2011 schedule
Confirmed oral presentations
Akira ISHIHAMA (Hosei University)
Prokaryotic Genome Regulation: Multi-factor Promoters, Multi-target Regulators and Hierarchic Networks
Beny Spira (Universidade de S?o Paulo)
Stress-related genes in diarrheogenic E. coli
Bernhard Palsson (University of California San Diego)
Bruno Sobral (Virginia Bioinformatics Institute )
Carsten Kroeger (Trinity College Dublin)
The transcriptional architecture of Salmonella Typhimurium SL1344
Charles Dorman (Trinity College Dublin)
Global Regulation of Gene Expression in Escherichia coli and Salmonella enterica
Chetan Sood (Purdue University)
Response Fidelity and Stochastic Activation of the Environmental Phosphate Transducer in Escherichia Coli
Cynthia Sharma (Zentrum f?r Infektionsforschung)
Helicobacter pylori and Campylobacter jejuni as new model organisms for riboregulation
David Keating (Great Lakes Bioenergy Research Center)
Multiomic Analysis of Escherichia coli Ethanol Synthesis from Lignocellulose
David Rasko (Univeristy of Maryland, School of Medicine)
David W. Ussery (The Technical University of Denmark)
Evgeny Nudler (NYU Langon Medical Center)
Farren Isaacs (University of Yale)
Gisela Gigi Storz (National Institutes of Health)
Additional levels of regulation by small RNAs and small proteins
Gregory Boel (Columbia University)
YjjK, a member of the ATP binding cassette superfamily is a novel translational factor.
Hannes Link (ETH Zurich)
Identification of protein-metabolite interactions that mediate allosteric enzyme regulation in bacterial metabolism
Heather Quinn (Trinity College)
Differential expression of the ompR gene in Salmonella enterica serovar Typhimurium and Escherichia coli; implications for the OmpR regulon in acidic pH.
Hirotada Mori (+81-743-72-5669)
Towards complete understanding of cellular systems.
ian henderson (University of Birmingham)
Transcription of the plasmid-encoded toxin gene from enteroaggregative Escherichia coli is regulated by a novel co-activation mechanism involving CRP and Fis
Ines Thiele (University of Iceland)
Reconstruction of a multiscale model of metabolic-macromolecular synthesis machinery and its application to the evolution of codon use pattern
Jason Peters (University of Wisconsin-Madison)
Rho-dependent termination suppresses widespread antisense transcription in Escherichia coli
Jeff Orth (University of California, San Diego)
A comprehensive genome-scale reconstruction of Escherichia coli metabolism - 2011
Jennifer Reed (UW Madison)
Computational Methods for Re-Designing Metabolic and Regulatory Networks
Jim Hu (Texas A&M Univ.)
PortEco: integrating web resources for the biology of E. coli
Joerg Vogel (Institut f?r Molekulare Infektionsbiologie)
Hfq binding to transcribed 3’ regions
Johan Elf (Uppsala University)
Johan Paulsson (Harvard University)
Jose Puente (Instituto de Biotecnolog?a, UNAM)
The dual role of GrlA in the regulation of the locus of enterocyte effacement (LEE) genes of enteropathogenic Escherichia coli.
Julio Collado-Vides (UNAM)
Kathleen Marchal (Katholieke)
Kenn Gerdes (Newcastle University )
Bacterial Persistence by RNA Endonucleases
Kenneth Ritchie (Purdue University)
Investigations into protein mobility and interaction in E. coli: Application to understanding the dynamics of gene regulation
Marin Vulic (Northeastern University)
Molecular mechanisms of bacterial persistence to antibiotics
Meriem El Karoui (Unite MICALIS)
Double strand break repair in single Escherichia coli cells
Michael Laub (MIT/HHMI)
Milena Jaskolska (Newcastle University)
Competence regulon of E. coli: Expression of transcription factor Sxy is autoregulated at the level of transcription
Natalia Tschowri (Freie Universitaet Berlin)
The blue light-sensitive YcgF-YcgE pathway in Escherichia coli.
Peter Karp (SRI International)
Exploring Regulatory Networks in EcoCyc
Regine Hengge (Freie Universit?t Berlin)
Sandra Van Puyvelde (Centre of Microbial and Plant Genetics)
DNA sampling tool implemented for in vivo identification of regulatory proteins in Salmonella Typhimurium
Stephen Federowicz (University of California San Diego)
Elucidation of the transcriptional response to key physiological parameters in E. coli K12-MG1655
Stephen Fitzgerald (Dept. of Microbiology)
Expressional analysis of H-NS-like proteins in S.Typhimurium
Stephen J. W. Busby (The University of Birmingham)
Transcriptional regulation in E. coli:
Uwe Sauer (ETH)
Vanessa Sperandio (UT Southwestern)
When sweets go sour: Fucose sensing by enterohemorrhagic E. coli
Veronica Godoy (Northeastern University)
An SOS gene network in Acinetobacter baumannii? Comparison to the Escherichia coli paradigm
Xiaolin Zhang (university of wisconsin madison)
Adaptive evolution of E. coli Auxotroph Co-Cultures
Youfu Zhao (University of Illinois)
The orphan gene ybjN conveys pleiotropic effects on multicellular behavior and survival of Escherichia coli